Note
Go to the end to download the full example code.
EELS curve fitting#
Performs curve fitting to an EELS spectrum, plots the result and saves it as png file.
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69%|██████████████████████████ | 29.0M/42.3M [00:35<00:16, 809kB/s]
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76%|█████████████████████████████ | 32.3M/42.3M [00:39<00:11, 880kB/s]
77%|█████████████████████████████▏ | 32.4M/42.3M [00:39<00:11, 890kB/s]
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89%|█████████████████████████████████▋ | 37.5M/42.3M [00:45<00:09, 500kB/s]
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90%|██████████████████████████████████ | 37.9M/42.3M [00:45<00:06, 727kB/s]
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93%|███████████████████████████████████▎ | 39.2M/42.3M [00:47<00:03, 998kB/s]
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93%|███████████████████████████████████▍ | 39.5M/42.3M [00:47<00:03, 896kB/s]
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95%|███████████████████████████████████ | 40.0M/42.3M [00:48<00:01, 1.28MB/s]
95%|███████████████████████████████████▏ | 40.1M/42.3M [00:48<00:01, 1.19MB/s]
95%|███████████████████████████████████▏ | 40.3M/42.3M [00:48<00:01, 1.10MB/s]
95%|███████████████████████████████████▎ | 40.4M/42.3M [00:48<00:01, 1.03MB/s]
96%|████████████████████████████████████▍ | 40.5M/42.3M [00:48<00:01, 957kB/s]
96%|████████████████████████████████████▍ | 40.6M/42.3M [00:48<00:01, 891kB/s]
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96%|████████████████████████████████████▌ | 40.7M/42.3M [00:49<00:01, 775kB/s]
97%|████████████████████████████████████▋ | 40.9M/42.3M [00:49<00:01, 826kB/s]
97%|████████████████████████████████████▊ | 41.0M/42.3M [00:49<00:01, 864kB/s]
98%|████████████████████████████████████ | 41.2M/42.3M [00:49<00:00, 1.17MB/s]
98%|████████████████████████████████████▏| 41.4M/42.3M [00:49<00:00, 1.09MB/s]
98%|████████████████████████████████████▎| 41.5M/42.3M [00:49<00:00, 1.06MB/s]
98%|█████████████████████████████████████▍| 41.6M/42.3M [00:49<00:00, 988kB/s]
99%|█████████████████████████████████████▍| 41.7M/42.3M [00:49<00:00, 944kB/s]
99%|█████████████████████████████████████▌| 41.8M/42.3M [00:50<00:00, 876kB/s]
99%|█████████████████████████████████████▋| 41.9M/42.3M [00:50<00:00, 816kB/s]
99%|█████████████████████████████████████▊| 42.0M/42.3M [00:50<00:00, 833kB/s]
100%|█████████████████████████████████████▊| 42.1M/42.3M [00:50<00:00, 844kB/s]
100%|█████████████████████████████████████▉| 42.3M/42.3M [00:50<00:00, 927kB/s]
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100%|██████████████████████████████████████| 42.3M/42.3M [00:00<00:00, 266GB/s]
0%| | 0.00/66.1M [00:00<?, ?B/s]
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5%|██ | 3.52M/66.1M [00:04<01:29, 701kB/s]
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import hyperspy.api as hs
s = hs.load("coreloss_spectrum.msa", signal_type="EELS")
low_loss = hs.load("lowloss_spectrum.msa", signal_type="EELS")
s.add_elements(("Mn", "O"))
s.set_microscope_parameters(
beam_energy=300, convergence_angle=24.6, collection_angle=13.6
)
m = s.create_model(low_loss=low_loss)
m.enable_fine_structure()
m.multifit(kind="smart")
m.plot()
# one can also use the Dirac GOS by specifying the GOS parameter
m = s.create_model(low_loss=low_loss, GOS="dirac")
m.enable_fine_structure()
m.multifit(kind="smart")
m.plot()
Total running time of the script: (2 minutes 13.990 seconds)